Chinese Journal of Magnetic Resonance ›› 2023, Vol. 40 ›› Issue (3): 320-331.doi: 10.11938/cjmr20223046
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ZHANG Jiajun1,LU Yucheng2,BAO Yifang2,LI Yuxin2,GENG Chen3,4,#(),HU Fuyuan1,§(),DAI Yakang1,3,*()
Received:
2022-12-16
Published:
2023-09-05
Online:
2023-03-03
Contact:
*Tel: 15850168495, E-mail: CLC Number:
ZHANG Jiajun, LU Yucheng, BAO Yifang, LI Yuxin, GENG Chen, HU Fuyuan, DAI Yakang. An Automatic Segmentation Method of Cerebral Arterial Tree in TOF-MRA Based on DBCNet[J]. Chinese Journal of Magnetic Resonance, 2023, 40(3): 320-331.
Fig. 3
The architecture diagram of DBCNet network. Where Dec is the decoding block of the network, BiA and SC are the branch decoupling module and deep feature extraction module proposed in this study. The final output feature maps $f_{i}^{\text{C}}$ and $f_{i}^{\text{D}}$ of the BiA module are obtained, where C and D represent the localization branch and the segmentation branch, respectively, and i takes 1, 2 and 3 to represent different BiA modules
Fig. 6
3D reconstruction for DBCNet intracranial arterial tree region segmentation prediction results. Row A shows the arterial tree 3D reconstruction (threshold segmentation result of TOF-MRA), labeled real values and segmentation results of a healthy person; row B shows the arterial tree 3D reconstruction, labeled real values and segmentation results of a patient with intracranial aneurysm, the patient’s aneurysm is in the anterior cerebral artery (ACA) region. The visual effect of the real values and model segmentation results is different because the labeled real values are drawn manually using solid spheres, while the model segmentation results are obtained by up-sampling back to the original image size after voxel-level segmentation. Internal carotid arteries (ICA, blue), basilar artery (BA, green), vertebral artery (VA, purple), middle cerebral artery (MCA, yellow), anterior (ACA, red) and posterior cerebral artery (PCA, cyan)
Table 2
Segmentation performance evaluation of each region of the intracranial arterial tree in the testing data set
ACA | BA | ICA | MCA | PCA | VA | 平均 | |
---|---|---|---|---|---|---|---|
Dice/% | 86.32±4.59 | 81.56±3.54 | 92.52±1.25 | 86.53±3.44 | 81.66±3.15 | 82.92±6.28 | 74.72±3.36 |
HD95/mm | 3.30±2.32 | 4.94±2.97 | 1.27±0.87 | 3.64±2.41 | 5.16±3.02 | 5.05±5.85 | 3.89±1.30 |
Table 3
Segmentation performance evaluation of each region of the intracranial arterial tree in the testing data set using DBCNet and other common deep learning networks
ACA | BA | ICA | MCA | PCA | VA | 平均 | ||
---|---|---|---|---|---|---|---|---|
nnUNet | Dice/% | 52.18±2.29 | 0 | 80.03±5.93 | 57.00±2.15 | 45.00±15.81 | 0 | 26.78±3.91 |
HD95/mm | 31.74±8.50 | 30 | 8.29±11.01 | 21.91±14.10 | 27.15±4.08 | 30 | 24.84±3.94 | |
Modified UNet | Dice/% | 77.89±5.14 | 81.01±7.22 | 89.49±2.67 | 76.26±2.94 | 0 | 0 | 49.90±3.59 |
HD95/mm | 6.48±4.48 | 8.49±14.01 | 4.95±10.67 | 7.99±3.32 | 30 | 30 | 14.65±2.69 | |
VNet | Dice/% | 58.70±22.74 | 73.56±7.79 | 89.46±3.81 | 70.86±4.16 | 72.97±5.66 | 70.04±14.56 | 54.56±8.59 |
HD95/mm | 13.56±8.43 | 12.59±14.59 | 5.16±11.03 | 15.76±4.84 | 22.81±6.57 | 14.33±6.69 | 14.04±8.69 | |
DBCNet | Dice/% | 86.32±4.59 | 81.56±3.54 | 92.52±1.25 | 86.53±3.44 | 81.66±3.15 | 82.92±6.28 | 74.72±3.36 |
HD95/mm | 3.30±2.32 | 4.94±2.97 | 1.27±0.87 | 3.64±2.41 | 5.16±3.02 | 5.05±5.85 | 3.89±1.30 |
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