波谱学杂志 ›› 2009, Vol. 26 ›› Issue (1): 136-149.

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用核磁共振方法研究金属离子与蛋白质的相互作用

张芳; 林东海*   

  1. (中国科学院 上海药物研究所, 上海生命科学研究院, 上海 201203)
  • 收稿日期:2008-08-28 修回日期:2008-10-10 出版日期:2009-03-05 发布日期:2009-12-05
  • 通讯作者: 林东海

Interaction of Proteins with Metal Ions Studied by NMR Techniques: A Review

ZHANG Fang; LIN Dong-hai*   

  1. (Shanghai Institute of Materia Medica, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 201203, China)
  • Received:2008-08-28 Revised:2008-10-10 Online:2009-03-05 Published:2009-12-05
  • Contact: LIN Dong-hai

摘要: 许多蛋白质含有金属离子,金属离子对蛋白质发挥生物学功能起着很大的作用. 金属离子与蛋白质的相互作用以及参与蛋白质功能调节的方式各种各样:有些金属离子高度专一性地与蛋白质紧密结合,对蛋白质发挥生物学功能起着关键性的作用;有些金属离子只是作为蛋白质发挥功能的辅助因子而瞬态地与蛋白质松散结合. 本文简要介绍目前国际上用NMR方法研究抗磁金属离子和顺磁金属离子与蛋白质相互作用的进展,并具体介绍了NMR方法在钙调蛋白、锌指蛋白、朊病毒蛋白等金属离子蛋白研究上的应用.

关键词: 金属离子与蛋白质相互作用, 核磁共振(NMR), 化学位移扰动, 骨架动力学, 顺磁效应, 三维结构

Abstract: Metal ions interact with protein using a great variety of mechanisms to regulate protein functions. Some metal ions bind tightly and specifically to proteins and markedly regulate protein function, while others interact loosely and nonspecifically with proteins and only act as cofactors for protein functioning. In this review, we describe nuclear magnetic resonance (NMR) techniques which are widely used to investigate inter-molecular interactions between proteins and diamagnetic/paramagnetic metal ions. Special emphasis is put on the NMR techniques the can be used to elucidate the structure and function of metalloproteins, including chemical shift mapping, paramagnetic NMR and backbone dynamics detection. Examples are given to illustrate how the NMR techniques can be used to map inter-molecular interaction between proteins (calmodulin, zinc fingers and prion proteins) and metal ions.

Key words: NMR, protein-metal ion interaction, chemical shift mapping, backbone dynamics, paramagnetic effect, 3D structure

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