[ 1] Bock L C, Griffin L C, Latham J A, et al. Selection of single-stranded DNA molecules that bind and inhibit human thrombin[J]. Nature, 1992, 355(6360):564-566.
[2] Padmanabhan K, Padmanabhan K P, Ferrara J D, et al. The structure of alpha-thrombin inhibited by a 15-mer single stranded DNA aptamer
[J]. J Biol Chem, 1993, 268(24):17 651-17 654.
[3] Wang J Y, Krawczyk S H, Bischofberger N, et al. The tertiary structure of a DNA aptamer which binds to and inhibits thrombin determines activity\
[J]. Biochemistry, 1993, 31:11 285-11 292.
[4] Wang J Y, McCurdy S, Shea R G, et al. A DNA aptamer which binds to and inhibits thrombin exhibits a new structural motif for DNA[J]. Biochemistry, 1993, 32:1 899-1 904.
[5] Macaya R F, Schultze P, Smith F W, et al. Thrombin binding DNA aptamer forms a unimoleculr quadruplex structure in solution[J]. Proc Natl Acad Sci USA, 1993, 90(8):3 745-3 749.
[6] Schultze P, Macaya R F, Feigon J. 3-dimensional solution structure of the thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG)[J]. J Mol Biol, 1994, 235(5):1 532-1 547.
[7] Kelly J A, Feigon J, Yeates T O. Reconciliation of the X-ray and NMR structures of the thrombin-binding aptamer d (GTTGGTGTGGTTGG)[J]. J Mol Biol, 1996, 256(3):417-422.
[8] Marathias V M, Wang K Y, Kumar S, et al. Determination of the number and location of the manganese binding sites of DNA quadruplexes in solution by EPR and NMR in the presence and absence of thrombin[J]. J Mol Biol, 1996, 260(3):378-394.
[9] Marathias V M, Bolton P H. Structure of potassium-saturated, 2∶1, and intermediate, 1∶1, forms of quadruplex DNA[J]. Nucl Acids Res, 2000, 28(9):1 969-1 977.
[10] Smirnov I, Shafer R H. Lead is unusually effective in sequencespecific folding of DNA[J]. J Mol Biol, 2000, 296:1-5.
[11] Kankia B I, Marky L A. Folding of the thrombin aptamer into a G-quadruplex with Sr2+:stability, heat and hydration[J]. J Am Chem Soc, 2001, 123(44):10 799-10 804.
[12] Smirnov I V, Kotch F W, Pickering I J, et al. Pb EXAFS studies on DNA quadruplexes: identification of metal ion binding site[J]. Biochemistry, 2002, 41(40):12 133-12 139.
[13] Vairamani M, Gross M L. G-quadruplex formation of thrombin-binding aptamer detected by electrospray ionization mass spectrometry[J]. J Am Chem Soc, 2003, 125(1):42-43.
[14] Kumar N, Maiti S. Quadruplex to Watson-Crick duplex transition of the thrombin binding aptamer:a fluorescence resonance energy transfer study
[J]. Biochem Bioph Res Commun, 2004, 319(3):759-767.
[15] Mao X A, Marky L A, Gmeiner W H. NMR structure of the thrombin-binding DNA aptamer stabilized by Sr2+[J]. J Biomol Struct Dyn, 2004, 22(1): 25-33.
[16] Mao X A, Gmeiner W H. NMR study of the folding-unfolding mechanism for thrombin-binding DNA aptamer d(GGTTGGTGTGGTTGG)[J]. Biophys Chem, 2005, 113(2):155-160.
[17] Liu M L, Mao X A, Ye C H, et al. Improved WATERGATE pulse sequences for solvent NMR resonance suppression[J]. J Magn Reson, 1998, 132(1):125-129.
[18] Englander S W, Kallenbach N R. Hydrogen-exchange and structural dynamics of proteins and nucleic-acids[J]. Q Rev Biophys, 1983, 16:521-655.
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