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Design and Performance of a New Multifunction X-band EPR Spectrometer
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Yu HE,Zhi-fu SHI,Xin-Xing ZHAO,Tao SU,Ji-hu SU
Chinese Journal of Magnetic Resonance, 2022, 39(1): 1-10.
DOI: 10.11938/cjmr20212965
A new multifunction X-band electron paramagnetic resonance (EPR) spectrometer is designed and produced, which is equipped with a new operation system based on the EPR control and readout system (CRS). The new continuous-wave (cw) dual-mode resonator and the dielectric resonators for respectively the pulsed EPR and transient EPR (trEPR) are designed purposely. The adoption of CRS system improves significantly the integration and expandability. The spectrometer is equipped with cryogen-free EPR variable temperature system with a range of 6~300 K. Thereafter, three typical samples are used to demonstrate the elegant design of the spectrometer by the cw dual-mode EPR, pulsed EPR and trEPR experiments. Perspectively, this design herein will be a criterion or option of the new generation of EPR spectrometer.
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Dual-modal MRI T 1 -T 2 Contrast Agent Based on Dynamic Organic Gadolinium Nanoparticles
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Ju-min ZHANG,Shi-zhen CHEN,Xin ZHOU
Chinese Journal of Magnetic Resonance, 2022, 39(1): 11-19.
DOI: 10.11938/cjmr20212902
In this work, a new magnetic resonance imaging (MRI) contrast agent based on organic gadolinium (Gd) nanoparticles was designed, synthesized and tested. Based on a biocompatible condensation reaction between 1, 2-aminothiol and cyano group, organic Gd nanoparticles with well-controlled diameter in the range of 8~23 nm were successfully synthesized. When used as the MRI contrast agent, the organic Gd-nanoparticles exhibited slowly weakened longitudinal relaxivity with time. Meanwhile, its transverse relaxivity was observed to be enhanced firstly and then gradually weakened, which could be attributed to the diameter increase of the Gd-nanoparticles. The simultaneous existence of time-dependent longitudinal and transverse relaxivities of the organic Gd-nanoparticles suggests their potential to be advanced T 1 -T 2 dual-modal contrast agent for MRI.
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3D Dynamic MRI with Homotopic l 0 Minimization Reconstruction
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Yan-yan LI,Lv LI,Xue-song LI,Hua GUO
Chinese Journal of Magnetic Resonance, 2022, 39(1): 20-32.
DOI: 10.11938/cjmr20212912
Recovering dynamic magnetic resonance imaging (MRI) from highly undersampled raw data is of great significance, and is an important approach for achieving both high temporal and spatial resolution in dynamic contrast enhanced imaging. In this study, a method for 3D dynamic MRI with high spatiotemporal resolution and motion insensitivity was developed, which combines golden angle variable density spiral trajectory, parallel imaging and homotopic l 0 minimization-based compressed sensing. Golden angle variable density spiral trajectory, which has the advantages of high data acquisition efficiency and motion insensitivity, was used to acquire k -space data. In the reconstruction algorithm, multicoil sparsity constrain was applied in the temporal total variation domain and l 0 minimization, instead of traditional l 1 minimization, was adopted, which could further increase the undersampling rate. Simulations and in vivo experiments demonstrated that high spatial resolution and temporal resolution can be achieved by the proposed method while maintaining the image quality. This study also suggested the advantages of homotopic l 0 norm-based 3D dynamic MRI reconstruction and its clinical potential.
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CEST Imaging of the Abdomen with Neural Network Fitting
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Zhi-chao WANG,Ji-lei ZHANG,Yu ZHAO,Ting HUA,Guang-yu TANG,Jian-qi LI
Chinese Journal of Magnetic Resonance, 2022, 39(1): 33-42.
DOI: 10.11938/cjmr20212903
Chemical exchange saturation transfer (CEST) imaging shows great potential in clinical applications. However, CEST imaging is challenging in abdomen due to the large B 0 shift. Meanwhile, the nuclear Overhauser enhancement (NOE) effect contaminates amide proton transfer (APT) image when using the conventional asymmetry analysis. In this paper, a CEST post-processing approach based on neural network fitting was proposed. Through recognizing the characteristics of acquired Z -spectrum, the background reference Z -spectrum and the B 0 offset were obtained and used to correct the acquired Z -spectrum. The APT effect and NOE effect could be calculated by subtracting the background reference Z -spectrum from the acquired Z -spectrum. The proposed CEST post-processing approach was validated by the egg white imaging and the abdomen imaging on four healthy volunteers.
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Prediction of Preoperative T Staging of Rectal Cancer Based on Radiomics
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Nan WANG,Yuan-jun WANG,Peng LIAN
Chinese Journal of Magnetic Resonance, 2022, 39(1): 43-55.
DOI: 10.11938/cjmr20212908
T staging plays an important role in the preoperative evaluation of rectal cancer. However, the traditional stage judging method directly based on the patients' MRI images is not effective. In this paper, we proposed to predict the T-stage of rectal cancer by using radiomics. First, the imaging data of 105 patients with rectal cancer were obtained, the patients in T1 and T2 stages were classified as non-breakthrough muscular layer group (31 cases), and the patients in T3 and T4 stages were classified as breakthrough muscular layer group (74 cases). In the axial T2WI image of patients, the region of interest (ROI) was segmented, and the radiomics features were extracted using the pyradiomics toolkit. The high-dimensional features were selected using least absolute shrinkage and selection operator (LASSO), and the feature data highly related to T stage were obtained. Four machine learning methods including logistic regression, support vector machine (SVM), gradient boosting decision tree (GBDT) and random forest were used in modeling respectively. Cross validation was performed to evaluate the performance of each model. 100 dimensional features were extracted from each image layer, and 7 features highly related to T stage were obtained after lasso feature selection. Among the four machine learning methods, SVM performed best. The average area under curve (AUC), accuracy, sensitivity and specificity of SVM method were 0.968 5, 0.886 4, 0.962 5 and 0.899 2 respectively, and the accuracy of verification set reached about 0.904 7. The result proved that radiomics can greatly improve the accuracy of T-stage prediction of rectal cancer.
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A Study on the Alteration of Spontaneous Brain Activity in Somatic Symptoms Disorder Combining Regional Homogeneity and Amplitude of Low-frequency Fluctuation
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Yang-yang CUI,Huai-bin LIANG,Qian ZHU,Wei TANG,Ting-ting GAO,Jian-ren LIU,Xiao-xia DU
Chinese Journal of Magnetic Resonance, 2022, 39(1): 64-71.
DOI: 10.11938/cjmr20212894
Somatic symptom disorder (SSD) is a common medical disorder characterized by various biological, psychological, and social pathogenic factors. At present, little is known about the neural mechanism of SSD. This study evaluated the dysfunction in 45 patients with SSD and 43 controls by combining the amplitudes of low-frequency fluctuation (ALFF) and regional homogeneity (ReHo) methods with resting-state functional magnetic resonance imaging (fMRI). The patients with SSD exhibited significantly greater ReHo values in the right middle cingulate gyrus, and smaller ReHo values in the right precuneus, the left inferior temporal gyrus extending to the left middle temporal gyrus and the left parahippocampal gyrus, and the right pons compared with the controls. The SSD patients showed higher ALFF values in the middle cingulate gyrus extending to the left middle frontal gyrus, the right insula extending to the right inferior frontal gyrus, and left middle frontal gyrus extending to the left anterior cingulate cortex. These dysfunction areas are involved in self-relevant processes, emotional processing, and body perception, which are closely related to the pathogenesis of SSD.
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The Effect of T69E-mimicked Phosphorylation on the Interaction Between Bcl-2 and Nur77
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Qian XU,Lang CHEN,Xiang-ying HU,Cong-gang LI,Yi-xiang LIU,Ling JIANG
Chinese Journal of Magnetic Resonance, 2022, 39(1): 87-95.
DOI: 10.11938/cjmr20212901
Bcl-2 mainly executes anti-apoptotic function in the Bcl-2 family. Nuclear orphan receptor Nur77 can be translocated from nucleus to mitochondria, then interact with Bcl-2 to reverse the function of Bcl-2 from a cell protector to a cell killer, thereby inducing cell apoptosis. The function of Bcl-2 is regulated by post-translational modification, such as the phosphorylation of T69 in the intrinsically disordered loop between BH3 and BH4 motifs. However, due to the lack of structural information of the full-length protein, the effect of phosphorylation modification of T69 in the loop region on the interaction of the two proteins is still unclear, and there is a lack of related research at the atomic level. Therefore, we constructed a full-length intracellular Bcl-2 containing loop region and T69E mutant to mimic stable phosphorylation modification, and investigated the interactions by combining circular dichroism (CD), Western blot and nuclear magnetic resonance (NMR) methods. It was observed that the full-length Bcl-2 had a stronger interaction with Nur77 compared to the Bcl-2/xl chimera, and the phosphorylation modification mimicked by T69E weakened the interaction between Bcl-2 and Nur77. The results will promote future research based on Bcl-2 and Nur77 signal transduction pathways and the apoptosis targeting cancer cells.
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Preparing Nuclear Spin Singlet State in a Three-spin System and Its Application in 2D Spectrum
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Kai-rui HU,Xue YANG,Zhi-ming HUANG,Jia-xiang XIN,Da-xiu WEI,Ye-feng YAO
Chinese Journal of Magnetic Resonance, 2022, 39(1): 96-107.
DOI: 10.11938/cjmr20212910
Nuclear spin singlet state is a special spin state, whose main characteristic is that its lift-time can be much longer than the corresponding longitudinal/transverse relaxation time. It can be used to study molecular slow diffusion, slow motion, special signal selection or other molecular motion. In the literature, singlet states are mainly studied in an isolated two-spin system. Here we discuss the nuclear spin singlet state preparation in a three-spin system. The system consisting of three protons in the molecule N-acetyl aspartic acid (NAA) was used as an example. Specifically, we used optimal control theory and numerical calculation method to design the pulse sequence and to transfer the two spins in methylene group into singlet state. The shaped pulses including and not including the proton in the methyne group were designed respectively. Our simulation results indicate that to ensure a high efficiency for the singlet state preparation, the coupling of the proton in the methyne group should be included in the pulse calculation. Furthermore, the singlet state can be combined with two-dimensional pulse sequences such as COSY and NOESY. The experimental results show that some correlation peaks could be selectively observed in the two-dimensional spectrum based on singlet state. It will be useful for the spectral peak assignment especially in the case of serious spectral overlap.
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A Physics Package with Shot-noise Limited Frequency Stability Better Than 1×10-13 τ -1/2 for Rubidium Atomic Frequency Standards
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Shuai NIE,Peng-fei WANG,Feng ZHAO,Fang WANG,Gang MING,Zi-jing QIU,Song-bai KANG,Gang-hua MEI
Chinese Journal of Magnetic Resonance, 2022, 39(1): 108-114.
DOI: 10.11938/cjmr20212897
The performance of the rubidium (Rb) atomic frequency standard has achieved significant improvement in recent years. Its frequency stability has already reached the order of 10-13 τ -1/2 . To further improve Rb frequency standard's stability performance, we developed a high signal-to-noise ratio (SNR) physics package whose cavity-cell assembly consists of a slotted-tube microwave cavity, separated filter and absorption cells. The microwave cavity has a homogenous field distribution along the quantization axis, and the filter and absorption cells are temperature-controlled independently. We also used an optical and isotopic filtering scheme to suppress shot noise from the pumping light. The physics package's final background photocurrent I 0 and the frequency discrimination slope Kd were measured to be 95 μA and 7.7 nA/Hz, respectively, and the calculated limit stability of the shot noise of the physical package was 7.5×10-14 τ -1/2 . The result shows that Rb frequency standard can reach an unprecedented stability level below 1×10-13 τ -1/2 as long as the electronic system's noise could be well controlled.
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Design of Broadband T/R Switch for Magnetic Resonance
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Shou-quan YAO,Jun-cheng XU,Ming SHEN,Bing-wen HU,Yi-qiao SONG,Yu JIANG
Chinese Journal of Magnetic Resonance, 2022, 39(1): 115-122.
DOI: 10.11938/cjmr20212895
Transmit/receive (T/R) switch is used to switch the transmission and reception channels in nuclear magnetic resonance (NMR) spectrometer, which is required high isolation of high-power signals and low insertion loss of NMR signals. In addition, the general narrowband T/R switch is no longer applicable in broadband magnetic resonance spectrometer. This paper presents a positive-intrinsic-negative (PIN) diode-based T/R switch design with low insertion loss (less than 1 dB), high isolation of high-power signals (more than 75 dB) and short switching time (1 μs) in broadband (10~100 MHz). Substituting the broadband T/R switch for the narrowband T/R switch of the general probe, the NMR signals of hydrogen and fluorine nuclei at two different frequencies were measured on a 0.5 T NMR spectrometer, which verified the broadband performance of the T/R switch.