一种新的磁共振图像处理流水线的设计与实现

doi:10.11938/cjmr20172588

波谱学杂志 ›› 2018, Vol. 35 ›› Issue (1): 40-51.doi: 10.11938/cjmr20172588

一种新的磁共振图像处理流水线的设计与实现

罗庆¹, 张成秀², 李文静³, 郑慧², 谢海滨^1,2, 杨光^1,2

1. 华东师范大学物理与材料科学学院, 上海市磁共振重点实验室, 上海 200062;
2. 上海卡勒幅磁共振技术有限公司, 上海 201614;
3. 上海纽迈电子科技有限公司, 上海 200333

收稿日期:2017-07-14 出版日期:2018-03-05 发布日期:2018-03-05
通讯作者: 谢海滨,杨光,Tel:021-62233873,E-mail:hbxie@phy.ecnu.edu.cn;杨光,Tel:021-62233873,E-mail:gyang@phy.ecnu.edu.cn. E-mail:hbxie@phy.ecnu.edu.cn;gyang@phy.ecnu.edu.cn
基金资助:
国家高技术研究发展计划（“863计划”）资助项目（2014AA123401）.

Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images

LUO Qing¹, ZHANG Cheng-xiu², LI Wen-jing³, ZHENG Hui², XIE Hai-bin^1,2, YANG Guang^1,2

1. Shanghai Key Laboratory of Magnetic Resonance, School of Physics and Materials Science, East China Normal University, Shanghai 200062, China;
2. Shanghai Colorful Magnetic Resonance Technology Corporation Limited, Shanghai 201614, China;
3. Shanghai Niumag Electronic Technology Corporation, Shanghai 200333, China

Received:2017-07-14 Online:2018-03-05 Published:2018-03-05

摘要/Abstract

摘要： 磁共振图像的重建、后处理及可视化是磁共振成像（MRI）系统的重要组成部分.本文开发了一个新的用于磁共振图像重建、后处理及可视化的开源框架YAP（Yet Another Pipeline），利用此框架可以方便地构建图像处理流水线.与现有的一些其他开源框架相比，本文开发的框架具有如下特点：（1）采用基于接口的设计，可使用基于接口的插件对流水线的功能进行扩展；（2）允许用户使用编写脚本的方式构建图像处理流水线，编辑与修改流水线都很方便；（3）支持带有分支结构的流水线，便于流水线的构建与调试.目前，该框架已经在商用系统中获得了应用.

关键词: 磁共振成像(MRI), 处理流水线, YAP, 开源, 医学图像处理, 压缩感知(CS)

Abstract: Reconstruction, post-processing and visualization of images are important parts of magnetic resonance imaging (MRI). In this work, a new open source framework, namely Yet Another Pipeline (YAP), was proposed for reconstruction, post-processing and visualization of MR images. With YAP, researchers can build customized image-processing pipelines with ease. Compared with the existing open source frameworks, YAP has the following features:(1) it has an interface-based design, enabling function extension by plugin development; (2) it uses a script language with straightforward grammar, making it easy to build and modify customized pipelines; (3) it supports branches in the pipelines, facilitating pipeline building and debugging. YAP has been implemented on a commercial MRI system.

Key words: magnetic resonance imaging (MRI), processing pipeline, Yet Another Pipeline (YAP), open source, medical image processing, compressed sensing (CS)

中图分类号:

O482.53

罗庆, 张成秀, 李文静, 郑慧, 谢海滨, 杨光. 一种新的磁共振图像处理流水线的设计与实现[J]. 波谱学杂志, 2018, 35(1): 40-51.

LUO Qing, ZHANG Cheng-xiu, LI Wen-jing, ZHENG Hui, XIE Hai-bin, YANG Guang. Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images[J]. Chinese Journal of Magnetic Resonance, 2018, 35(1): 40-51.

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一种新的磁共振图像处理流水线的设计与实现

Design and Implementation of a Novel Processing Pipeline for Magnetic Resonance Images

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